Zhang H, Hunter MV, Chou J, Quinn JF, Zhou M, White RM, Tansey W. BayesTME: An end-to-end method for multiscale spatial transcriptional profiling of the tissue microenvironment. Cell Syst. 2023 Jul 19;14(7):605-619.e7. doi: 10.1016/j.cels.2023.06.003. PMID: 37473731; PMCID: PMC10368078.

Freeman BA, Jaro S, Park T, Keene S, Tansey W, Reznik E. MIRTH: Metabolite Imputation via Rank-Transformation and Harmonization. Genome Biol. 2022 Sep 1;23(1):184. doi: 10.1186/s13059-022-02738-3. PMID: 36050754; PMCID: PMC9438248.

Tansey W, Li K, Zhang H, Linderman SW, Rabadan R, Blei DM, Wiggins CH. Dose-response modeling in high-throughput cancer drug screenings: an end-to-end approach. Biostatistics. 2022 Apr 13;23(2):643-665. doi: 10.1093/biostatistics/kxaa047. PMID: 33417699; PMCID: PMC9007438.

Sudarshan M, Tansey W, Ranganath R. Deep direct likelihood knockoffs. Adv Neural Inf Process Syst. 2020 Dec;33:5036-5046. PMID: 33953523; PMCID: PMC8096517.